Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885989.1_cds_XP_016440084.1_35576
CDS Infomation

[gene=LOC107765899] [db_xref=GeneID:107765899] [protein=putative PAP-specific phosphatase, mitochondrial isoform X2] [protein_id=XP_016440084.1] [location=complement(join(20841..20990,22149..22199,22273..22351,22939..23315,24197..24256,24906..25114,26804..26906,27694..27796,27948..28042))] [gbkey=CDS]
Sequence

ATGGATCTTCTCCGTTACTCCGCCTCCCGCTTCCCTGCAGCTCATCCTCAGTATCCCTTC
CATACGCCGCTTCGCCGGCGCTTCGTCGCCGTTAGGTCGAGTTTGAGCCTTCCGTTCCCG
GAGCAGAAAGCCAAGTATTATAGGGAGCTGGAAGCTGCTGTAGATGTTGTCGAGCGAGCT
TGTCGTCTGTGCGTTGATGTGAAGAAATCGTTGTTCTCAAGTAATGGTAGGATTCTTGAG
AAAATTGACCAGACCCCAGTCACTATTGCAGATTTTGGAGTGCAGGCTTTAGTTAGCTTG
GAGATGAACAGACTTTTTCCCTCTATCCCCCTGGTGGCTGAAGAGGACTCTGCATTCTTG
CGTTCAAATAATCTAGTTGGCTCAGTGGTTGATGTTGTAAAGGATAAAGCAACTTCAGGA
TATGAAGTAACAGATGATAATATTTTGAAAGCAATTGACAGAGGGGGAAAGGATGCTTGT
GTATTTGGGCCTAAACCAGCCACTTACTGGATACTGGATCCTATTGATGGTACACGAGGG
TTTGTTAAAGGTAGCGAGGCTCTCTATGTGGTGGGTTTGGCACTTGTAGTTGAAGGACAG
ATTGTTTTGGGGGTCATGGGCTGCCCCAATTGGTGCGAAGACTGTTCTGAGAATTCTATC
GTTGGGGTCCAAGAAAGTAGTAGTTCCAGATCAGGGATCATCATGGTTTCTCATGTGGGT
TGTGGAACATGGACAAAGAGGTTGTCAGACATACTAACCACTGAGTCATCTCACACTTGG
ACCGGATGCTCTGTTGACAGCTGCCAAATGGTGGAGGGGGCACGGTTTACTATTCCTGAA
AGTCAATCATGGAAATCATTACCCCTATCGGTTTTGTTTGATGCAAAAAGAGACTCAGAG
AACATAGGAAAAGGGAAAATACTTCTTCTGTCTGCATGCTGTGGGAGTTTGTGCAAATAT
CTGATGGTGGCTTCTGGTAGAGCATCGGTTTACATTCAGGGAAGGAAGGCGACATCTATT
ATCAAGGTCTGGGACCATGCTGTTGGAATCATATGTGTCCATGAAGCTGGAGGGAAGGTG
ACCGACTGGGCAGGAGGTTCACTTGATATTGCGGCAGATCAAACTGAACGGAGACTAATC
TTTCCTTCAGGCGGTGTTCTTGTGACTAATGGGAGCTTACACAGCAAGATTATTGGAATG
ATCTCTTCAAATTCGTCAGTTCTATGA

Peptide Sequence

PEP ID

XP_016440084.1
PEP Infomation

PREDICTED: putative PAP-specific phosphatase, mitochondrial isoform X2 [Nicotiana tabacum]
Sequence

MDLLRYSASRFPAAHPQYPFHTPLRRRFVAVRSSLSLPFPEQKAKYYRELEAAVDVVERA
CRLCVDVKKSLFSSNGRILEKIDQTPVTIADFGVQALVSLEMNRLFPSIPLVAEEDSAFL
RSNNLVGSVVDVVKDKATSGYEVTDDNILKAIDRGGKDACVFGPKPATYWILDPIDGTRG
FVKGSEALYVVGLALVVEGQIVLGVMGCPNWCEDCSENSIVGVQESSSSRSGIIMVSHVG
CGTWTKRLSDILTTESSHTWTGCSVDSCQMVEGARFTIPESQSWKSLPLSVLFDAKRDSE
NIGKGKILLLSACCGSLCKYLMVASGRASVYIQGRKATSIIKVWDHAVGIICVHEAGGKV
TDWAGGSLDIAADQTERRLIFPSGGVLVTNGSLHSKIIGMISSNSSVL

Transcript Sequence

Gene sequence data has not been registered.